b. Confirmative Test
• A loopful of sample from positive tubes was
transferred to an Eosin Methylene Blue (EMB)agar tube under aseptic
condition and the tubes marked as in the earlier test.
• The tubes were incubated370C for 48 hours
•
After incubation, positive tubes were recorded indicated by the
presence of blue black with metallic sheen colonies in the media.
• The reading was converted to MPN index / 100 ml using MPN index table presented in the Standard Methods.
Detection
of Salmonella species was done by the enrichment of water samples on
Selenite F broth, followed by isolation of the typical organism on
selective medium, Xylose Lysine Deoxycholate Agar (XLD) and Kieglar Iron
Agar (KIA). Detection of Vibrio cholerae was done by enriching the
samples in 1% alkaline peptone water for 6 to 8 hours followed by
isolation on Thiosulphate Citrate Bile salt sucrose (TCBS) agar medium
(Collee et al., 2009). For Pseudomonas aeruginosa both MacConkey agar,
Nutrient agar were used as presumptive cultures and Blood agar were used
to isolate Staphylococcus aureus (Benson, 2008). All colonies with
different characteristics on their selective media were identified on
the basis of their colonial, morphological and biochemical properties
following Bergey’s Manual of Determinative Bacteriology (Holt et al.,
2014).
The fungi were isolated from the water samples seasonally by
using two methods: The direct plate and the dilution plate, two types of
growth media were used for isolation of fungi, Potato Dextrose Agar
(PDA) and Sabouraud Dextrose Agar (SDA) supplemented with
chloramphenicol (50 mg/l) and cycloheximide (500 mg/l) and examined for
fungal growth over a period of four weeks.
3.3.2 Identification of Bacteria and Fungi Isolates
The
identification of the bacterial isolates was accomplished by the
observation of colonial characteristics, Gram reaction and biochemical
tests such as Oxidase test, Catalase test, Citrate test, Urease test,
Coagulase test, TSI (Triple Sugar Iron agar) test, MIO (Motility Indole
Ornithine) test and Methyl Red and Vogesproskauer test. Identification
of fungi isolate was carried out by adding a drop of lacto-phenol on
cotton blue stain placed on a clean grease slide and a sterile
inoculating needle used to tease out a fragment of the fungi and
transferred into the stain on the slide and covered with a cover slip
and examined with low power objective of the microscope x 40.
3.4 Statistical analysis
Statistical
analysis was conducted for the data using Statistical Package for the
Social Sciences software program, SPSS version 20 (SPSS Inc., USA) to
calculate the mean and Standard Deviation [SD]. The Student’s T-test and
Analysis of Variance [ANOVA] test, Post hoc test (Duncan) was applied
to determine significant differences in spatial and in temporal
variation. All data are expressed as mean ± SE. A p-value of 0.05 was
considered as the limit for statistical significance.